Job Description P77588 Confidence 99.74% Date Thu Jan 5 12:30:49 GMT 2012 Rank 15 Aligned Residues 109 % Identity 17% Template c2w07B_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:minor pilin subunit papf; PDBTitle: structural determinants of polymerization reactivity of the2 p pilus adaptor subunit papf Resolution 2.20 Å

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		180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure										.																	.	.	.	.	.	.	.	.
Query SS confidence										.																	.	.	.	.	.	.	.	.
Query Sequence		M	P	T	G	G	C	T	V	.	D	S	R	N	V	T	V	D	L	P	D	F	P	G	S	A	.	.	.	.	.	.	.	.	E	I	P	L	G	V	Y	C	S	S	E	Q	K	L	S	F	Y	L	S	G	A	T	T	D	S	S	R	Q	V	F	A	N	T	A	P	D	A	T	K	A	S	G	V	G	V	T	L
Query Conservation										.																	.	.	.	.	.	.	.	.
Alig confidence										.																	.	.	.	.	.	.	.	.													.																			.	.	.	.	.
Template Conservation																																															.																			.	.	.	.	.
Template Sequence		V	Y	I	P	P	C	T	I	N	N	G	Q	N	I	V	V	D	F	G	N	I	N	P	E	H	V	D	N	S	R	G	E	V	T	K	T	I	S	I	S	C	P	Y	G	S	.	L	W	I	K	V	T	G	N	T	M	G	G	G	Q	N	N	V	L	.	.	.	.	.	A	T	N	I	T	H	F	G	I	A	L
Template Known Secondary structure			S							G	G	G									S			S		S		S	S	S	S																.									B		S	S	S		S	S			.	.	.	.	.			S	S	T	T
Template Predicted Secondary structure																																															.																			.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.
		251	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure				.																																		.
Query SS confidence				.																																		.
Query Sequence		M	R	.	N	G	K	I	L	A	T	G	E	N	V	S	L	G	T	V	N	K	S	K	V	P	L	G	L	S	A	T	Y	G	Q	T	G	.	N	K	V	S	A	G	T	V	Q	S	V	I	G	V	T	F	I	Y	E
Query Conservation				.																																		.
Alig confidence				.									.	.	.	.	.	.	.	.	.	.																.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	G	K	G	M	S	T	P	L	T	.	.	.	.	.	.	.	.	.	.	L	R	S	T	F	T	F	T	S	V	P	F	R	N	G	S	G	I	L	N	G	G	D	F	R	T	T	A	S	M	S	M	I	Y	N
Template Known Secondary structure				S	S	S	S	S	S	B			.	.	.	.	.	.	.	.	.	.																	S			S		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions