Job Description P77588 Confidence 99.83% Date Thu Jan 5 12:30:49 GMT 2012 Rank 12 Aligned Residues 132 % Identity 17% Template c2jmrA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:fimf; PDBTitle: nmr structure of the e. coli type 1 pilus subunit fimf Resolution UNK

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.												.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		I	I	S	N	N	N	V	V	M	P	T	G	G	C	T	V	D	S	R	N	V	T	V	D	L	P	D	F	P	G	S	A	.	.	.	.	.	.	.	.	.	.	.	E	I	P	L	G	V	Y	C	S	S	E	Q	.	.	K	L	S	F	Y	L	S	G	A	T	T	D	S	S	R	Q	V	F	A	N	T	A	P
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.													.	.																			.
Template Conservation																																																																													.
Template Sequence		I	T	I	R	G	Y	V	R	D	N	G	C	S	V	A	A	E	S	T	N	F	T	V	D	L	M	E	N	A	A	K	Q	F	N	N	I	G	A	T	T	P	V	V	P	F	R	I	L	L	S	P	C	G	N	A	V	S	A	V	K	V	G	F	T	G	V	A	D	S	H	N	A	N	L	L	.	A	L	E	N
Template Known Secondary structure			S	S	S					S	S	S																B			G	G	G			S	T	T		B										B		S			S													B		S	S		T	T	S	B	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																.											.	.	.	.
Query SS confidence																.											.	.	.	.
Query Sequence		D	A	T	K	A	S	G	V	G	V	T	L	M	R	.	N	G	K	I	L	A	T	G	E	N	.	.	.	.	V	S	L	G	T	V	N	K	S	K	V	P	L	G	L	S	A	T	Y	G	Q	T	G	N	K	V	S	A	G	T	V	Q	S	V	I	G	V	T	F	I	Y	E
Query Conservation																.											.	.	.	.
Alig confidence																.											.	.	.	.
Template Conservation
Template Sequence		T	V	S	A	A	S	G	L	G	I	Q	L	L	N	E	Q	Q	N	Q	I	P	L	N	A	P	S	S	A	L	S	W	T	T	L	T	P	G	K	P	N	T	L	N	F	Y	A	R	L	M	A	T	Q	V	P	V	T	A	G	H	I	N	A	T	A	T	F	T	L	E	Y	Q
Template Known Secondary structure		S	T	T	B		S	S								T	T			B			S	S	S		G	G	G	S							S	S	S		B											S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions