Return to main results Retrieve Phyre Job Id

Job DescriptionP77588
Confidence1.87%DateThu Jan 5 12:30:49 GMT 2012
Rank63Aligned Residues56
% Identity14%Templatec2edhA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:obscurin; PDBTitle: solution structure of the pdz domain (3614- 3713 ) from2 human obscuring
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   248.250.........260.........270.........280...... ...290.........300....
Predicted Secondary structure 













..



Query SS confidence 






































. .

















Query Sequence  VTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGN. . KVSAGTVQSVIGVTFIYE
Query Conservation 


      
                     
 
  
  .. 

 
   
  
    

Alig confidence 

















.



















..

















Template Conservation 
 
               .        
 
      
 
 
 
 
 
    
 
 
   
Template Sequence  VEWWKGHETLRDGDRHSL. RQDGARCELQIRGLVAEDAGEYLCMCGKERTSAMLTVRAM
Template Known Secondary structure 
SSSB


SSS.TT
S

STT
TT


Template Predicted Secondary structure 






.









Template SS confidence 


























































   4950.........60...... ...70.........80.........90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions