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Job DescriptionP76254
Confidence100.00%DateThu Jan 5 12:21:16 GMT 2012
Rank9Aligned Residues225
% Identity22%Templatec1tvcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:methane monooxygenase component c; PDBTitle: fad and nadh binding domain of methane monooxygenase2 reductase from methylococcus capsulatus (bath)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30 .........40.........50.........60.........70.........
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Query Sequence  DYQMFEVQVSQVEPLTEQVKRFTLVATD. . . GKPLPAFTGGSHVIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEEN
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Template Sequence  EVGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGTD. . VSRSYSPANLPNPEGRLEFLIRVLPE
Template Known Secondary structure 
SSB


TT
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TTS
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   8.10.........20.........30.........40.........50......... 60.........70.........80.....
 
   80.........90.........100.........110. ........120.........130........ .140.........150......
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Query Sequence  SRGGSRFLHQQVKVGDRLTISTPNNLFALIPS. ARKHLFIAGGIGITPFLSHMAELQHSD. . VDWQLHYCSRNPESCAFR
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Template Sequence  GR. FSDYLRNDARVGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNTEPELFYI
Template Known Secondary structure  SS.SSSSSS


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SSS
SSTTT

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   86. ..90.........100.........110.........120.........130.........140.........150.........160....
 
   157..160.........170.........180 .........190.........200.........210.........220....
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Query Sequence  DELVQHPQAEKVHLHHSSTGTRLE. . . . . . . . . . . . LARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAADTLHFEQ
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Template Sequence  DELKSLERSMRNLTVKACVWHPSGDWEGEQGSPIDALREDLESSDANPDIYLCGPPGMIDAACELVRSRGIPGEQVFFEK
Template Known Secondary structure  SSS


SS
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SSSSSSSSSSSSSSS



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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   225....230
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Query Sequence  FAIEDK
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Template Conservation 
     
Template Sequence  FLPSGA
Template Known Secondary structure 
SSS

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   245....250
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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