Job Description P76254 Confidence 100.00% Date Thu Jan 5 12:21:16 GMT 2012 Rank 14 Aligned Residues 219 % Identity 22% Template c1qgyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp+ reductase; PDBTitle: ferredoxin:nadp+ reductase mutant with lys 75 replaced by glu (k75e) Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70
Predicted Secondary structure																			.	.	.	.	.																																		.	.	.	.												.	.	.	.
Query SS confidence																			.	.	.	.	.																																		.	.	.	.												.	.	.	.
Query Sequence		Y	Q	M	F	E	V	Q	V	S	Q	V	E	P	L	T	E	Q	.	.	.	.	.	V	K	R	F	T	L	V	A	T	D	G	K	P	L	P	A	F	T	G	G	S	H	V	I	V	Q	M	S	D	G	D	N	Q	.	.	.	.	Y	S	N	A	Y	S	L	L	S	S	P	.	.	.	.	H	D	T	S	C	Y
Query Conservation																			.	.	.	.	.																																		.	.	.	.												.	.	.	.
Alig confidence																			.	.	.	.	.													.	.																				.	.	.	.												.	.	.	.
Template Conservation																																				.	.
Template Sequence		N	A	P	F	I	G	K	V	I	S	N	E	P	L	V	K	E	G	G	I	G	I	V	Q	H	I	K	F	D	L	T	G	G	N	.	.	L	K	Y	I	E	G	Q	S	I	G	I	I	P	P	G	V	D	K	N	G	K	P	E	E	L	R	L	Y	S	I	A	S	T	R	H	G	D	D	V	D	D	K	T	I
Template Known Secondary structure		T	B													S		T	T		S	S										T	T	S		.	.					T	T								S	S	B		T	T	S		B								B		S		T	T	T	T	T	T	S	S	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		71	.	.	.	.	.	.										.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		Q	I	A	V	R	L	E	.	.	.	.	.	.	.	.	.	E	N	S	R	G	G	S	R	F	L	H	Q	Q	V	K	V	G	D	R	L	T	I	S	T	P	N	N	L	F	A	L	.	.	I	P	S	A	R	K	H	L	F	I	A	G	G	I	G	I	T	P	F	L	S	H	M	A	E	L	Q	H	S	D	V
Query Conservation									.	.	.	.	.	.	.	.	.																																.	.
Alig confidence									.	.	.	.	.	.	.	.	.												.																				.	.
Template Conservation																													.
Template Sequence		S	L	C	V	R	Q	L	E	Y	K	H	P	E	S	G	E	T	V	Y	G	V	C	S	T	Y	L	T	.	H	I	E	P	G	S	E	V	K	I	T	G	P	V	G	K	E	M	L	L	P	D	D	P	E	A	N	V	I	M	L	A	T	G	T	G	I	A	P	M	R	T	Y	L	W	R	M	F	K	D	A	E
Template Known Secondary structure												S	T	T	S	S	S	S											.	T			T	T											S	S	S				S		T	T									G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.										.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.										.	190
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	.	.	.	W	Q	L	H	Y	C	S	R	N	P	E	S	C	A	F	R	D	E	L	V	Q	H	P	Q	A	E	K	V	H	L	H	H	.	.	.	.	.	.	.	.	.	S	S	T	G	T	R	L	E	L	A	R	L	L	A	D	I	.	.	.	.	.	.	.	.	.	E	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	A	N	P	E	Y	Q	F	K	G	F	S	W	L	V	F	G	V	P	T	T	P	N	I	L	Y	K	E	E	L	E	E	I	Q	Q	K	Y	P	D	N	F	R	L	T	Y	A	I	S	R	E	Q	K	N	P	Q	G	G	R	M	Y	I	Q	D	R	V	A	E	H	A	D	Q	L	W	Q	L	I	K	N	Q
Template Known Secondary structure						T	T					S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T	S	S	B										T									T	S	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		G	T	H	V	Y	T	C	G	P	E	A	L	I	E	A	V	R	S	E	A	A	.	.	.	.	R	L	D	I	A	A	D	T	L	H	F	E	Q	F
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		K	T	H	T	Y	I	C	G	L	R	G	M	E	E	G	I	D	A	A	L	S	A	A	A	A	K	E	G	V	T	W	S	D	Y	Q	K	D	L	K
Template Known Secondary structure		T								S	T	T	S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions