Job Description P76254 Confidence 99.94% Date Thu Jan 5 12:21:16 GMT 2012 Rank 24 Aligned Residues 210 % Identity 24% Template c1j9zB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadph-cytochrome p450 reductase; PDBTitle: cypor-w677g Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	D	Y	Q	M	F	E	V	Q	V	S	Q	V	E	P	L	T	E	Q	.	.	.	.	V	K	R	F	T	L	V	A	T	D	G	K	P	L	P	A	F	T	G	G	S	H	V	I	V	Q	M	S	D	G	D	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.													.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		F	D	A	K	N	P	F	L	A	A	V	T	A	N	R	K	L	N	Q	G	T	E	R	H	L	M	H	L	E	L	D	I	S	D	S	K	.	.	I	R	Y	E	S	G	D	H	V	A	V	Y	P	A	N	D	S	A	L	V	N	Q	I	G	E	I	L	G	A	D	L	D	V	I	M	S	L	N	N	L	D	E
Template Known Secondary structure			B	T	T	B														S	S	S	S	S										T	T	S		.	.					T	T																						T			T	T								S		T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	N	K	K	H	P	F	P	C	P	T	T	Y	R	T	A	L	T	Y	Y	L	D	I	T	N	P	P	R	T	N	V	L	Y	E	L	A	Q	Y	A	S	E	P	S	E	Q	E	H	L	H	K	M	A	S	S	S	G	E	G	K	E	L	Y	L	S	W	V	V	E	A	R	R	H	I	L	A	I	L	Q	D
Template Known Secondary structure		T	S	S			S	S	S	S	S	S										T	B			S	S												T	T	B		S										T	T		S	S	S										T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
																				54	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.									.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	N	A	Y	S	L	L	S	S	P	.	H	D	T	S	C	Y	Q	I	A	V	R	L	E	E	.	.	.	.	.	.	.	.	N	S	R	G	G	S	R	F	L	H	Q	Q	V	K	V	G	D	.	R	L	T	I	S	T	P	N	N	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		Y	P	S	L	R	P	P	I	D	H	L	C	E	L	L	P	R	L	Q	A	R	Y	Y	S	I	A	S	S	S	K	V	H	P	N	S	V	H	I	C	A	V	A	V	E	Y	E	A	K	S	G	R	V	N	K	G	V	A	T	S	W	L	R	A	K	E	P	A	G	R	A	L	V	P	M	F	V	R	K	S	Q
Template Known Secondary structure		S	T	T	B											S		B										S		T	T	T		T	T														T	T	S	S												T							S										S
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		106	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.							.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.
Predicted Secondary structure								.																									.	.	.	.	.	.																		.																.	.	.
Query SS confidence								.																									.	.	.	.	.	.																		.																.	.	.
Query Sequence		F	A	L	I	P	S	.	A	R	K	H	L	F	I	A	G	G	I	G	I	T	P	F	L	S	H	M	A	E	L	Q	.	.	.	.	.	.	H	S	D	V	D	W	Q	L	H	Y	C	S	R	N	P	E	S	.	C	A	F	R	D	E	L	V	Q	H	P	Q	A	E	K	.	.	.	V	H	L	H	H	S	S
Query Conservation								.																									.	.	.	.	.	.																		.																.	.	.
Alig confidence								.																									.	.	.	.	.	.																		.																.	.	.
Template Conservation
Template Sequence		F	R	L	P	F	K	S	T	T	P	V	I	M	V	G	P	G	T	G	I	A	P	F	M	G	F	I	Q	E	R	A	W	L	R	E	Q	G	K	E	V	G	E	T	L	L	Y	Y	G	C	R	R	S	D	E	D	Y	L	Y	R	E	E	L	A	R	F	H	K	D	G	A	L	T	Q	L	N	V	A	F	S	R
Template Known Secondary structure						S	S	T	T	S								G	G	G	G																T	T													S		T	T	T	S		T	T										T	T	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		175		.	.	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure			.														.	.	.	.	.	.	.	.	.														.
Query SS confidence			.														.	.	.	.	.	.	.	.	.														.
Query Sequence		T	.	G	T	R	L	E	L	A	R	L	L	A	D	I	.	.	.	.	.	.	.	.	.	E	P	G	T	H	V	Y	T	C	G	P	E	A	.	L	I	E	A	V	R	S	E	A	A	R
Query Conservation			.														.	.	.	.	.	.	.	.	.														.
Alig confidence			.														.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		E	Q	A	H	K	V	Y	V	Q	H	L	L	K	R	D	R	E	H	L	W	K	L	I	H	E	G	G	A	H	I	Y	V	C	G	D	A	R	N	M	A	K	D	V	Q	N	T	F	Y	D
Template Known Secondary structure		S	S	S	S											T										T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions