Job Description P76254 Confidence 100.00% Date Thu Jan 5 12:21:16 GMT 2012 Rank 2 Aligned Residues 227 % Identity 23% Template c1gvhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavohemoprotein; PDBTitle: the x-ray structure of ferric escherichia coli2 flavohemoglobin reveals an unespected geometry of the3 distal heme pocket Resolution 2.19 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		S	D	Y	Q	M	F	E	V	Q	V	S	Q	V	E	P	L	T	E	Q	V	K	R	F	T	L	V	A	T	D	G	K	P	L	P	A	F	T	G	G	S	H	V	I	V	Q	M	S	D	G	D	N	.	.	Q	Y	S	N	A	Y	S	L	L	S	S	P	H	D	T	S	C	Y	Q	I	A	V	R	L	E	E	N
Query Conservation																																																					.	.
Alig confidence																																																					.	.															.
Template Conservation																																																																					.
Template Sequence		G	W	E	G	T	R	D	F	R	I	V	A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	.	K	G	Y	R	I	A	V	K	R	E	E	G
Template Known Secondary structure				S	S													S	S	S									T	T									T	T										T	T		S	S										S				S	.	S										T	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																		.																												.	.
Query SS confidence																																		.																												.	.
Query Sequence		S	R	G	G	S	R	F	L	H	Q	Q	V	K	V	G	D	R	L	T	I	S	T	P	N	N	L	F	A	L	I	P	S	.	A	R	K	H	L	F	I	A	G	G	I	G	I	T	P	F	L	S	H	M	A	E	L	Q	H	S	D	.	.	V	D	W	Q	L	H	Y	C	S	R	N	P	E	S	C	A	F	R
Query Conservation																																		.																												.	.
Alig confidence		.																																.																												.	.
Template Conservation		.
Template Sequence		.	G	Q	V	S	N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A
Template Known Secondary structure		.										T			T	T											S							T	T									G	G	G	G														T			S									S		T	T	T			S
Template Predicted Secondary structure		.
Template SS confidence
			227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		D	E	L	V	Q	H	P	Q	A	E	K	V	H	L	H	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	G	T	R	L	E	L	A	R	L	L	A	D	I	E	.	P	G	T	H	V	Y	T	C	G	P	E	A	L	I	E	A	V	R	S	E	A	A	R	L	D	I	A	A	D	T	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		D	E	V	K	E	L	G	Q	S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	P	T	M	Q	F	Y	L	C	G	P	V	G	F	M	Q	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N	I
Template Known Secondary structure										T	S	S	S								S	S									T			S			S	S			G	G	G	S	S	S					T	T							S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	E	Q	F	A	I	E	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	E	C	F	G	P	H	K	V
Template Known Secondary structure						S	S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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