Job Description P76254 Confidence 99.96% Date Thu Jan 5 12:21:16 GMT 2012 Rank 22 Aligned Residues 209 % Identity 21% Template c1ddiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha- PDBTitle: crystal structure of sir-fp60 Resolution 2.51 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.																	50	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query SS confidence																				.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Query Sequence		S	D	Y	Q	M	F	E	V	Q	V	S	Q	V	E	P	L	T	E	.	.	.	.	.	Q	V	K	R	F	T	L	V	A	T	D	G	K	P	L	P	A	F	T	G	G	S	H	V	I	V	Q	M	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	N	Q	Y	S	.	.	.	.	.
Query Conservation																				.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Alig confidence																				.	.	.	.	.														.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		S	K	D	A	P	L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	.	.	L	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P	A	L	V	K	E	L	V	E	L	L	W	L	K	G	D	E	P	V	T	V	E	G	K	T	L
Template Known Secondary structure			S	S	S													S		T	T		S											T	T	S		.	.					T	T																					T	T			T	T						T	T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
																																																																														56	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	Y	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	N	E	A	L	Q	W	H	F	E	L	T	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	E	T	L	L	P	L	V	G	D	K	A	K	L	Q	H	Y	A	A	T	T	P	I	V	D	M	V	R	F	S	P	A	Q	L	D	A	E	A	L	I	N	L	L	R	P	L	T	P	R	L	Y	S
Template Known Secondary structure										T	B			S																	T	T	T	G	G	G	T	T												S									S													S		B
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.													.	.	.	.	.	.	.																										.											.
Query SS confidence							.													.	.	.	.	.	.	.																										.											.
Query Sequence		L	L	S	S	P	.	H	D	T	S	C	Y	Q	I	A	V	R	L	.	.	.	.	.	.	.	E	E	N	S	R	G	G	S	R	F	L	H	Q	Q	V	K	V	G	D	R	L	T	I	S	T	.	P	N	N	L	F	A	L	I	P	S	.	A	R	K	H	L	F	I	A	G	G	I	G	I	T	P	F	L	S
Query Conservation							.													.	.	.	.	.	.	.																										.											.
Alig confidence							.													.	.	.	.	.	.	.																										.											.
Template Conservation
Template Sequence		I	A	S	S	Q	A	E	V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	V	E	G	R	A	R	A	G	G	A	S	S	F	L	A	D	R	V	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A	P	F	R	A
Template Known Secondary structure						T	T	T	S		S														T	T														S	S		S	S											T	T	S				S	S	T	T	S								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.
Predicted Secondary structure											.	.														.																.	.	.									.															.	.	.	.	.	.	.	.
Query SS confidence											.	.														.																.	.	.									.															.	.	.	.	.	.	.	.
Query Sequence		H	M	A	E	L	Q	H	S	D	.	.	V	D	W	Q	L	H	Y	C	S	R	N	P	E	.	S	C	A	F	R	D	E	L	V	Q	H	P	Q	A	E	.	.	.	K	V	H	L	H	H	S	S	.	T	G	T	R	L	E	L	A	R	L	L	A	D	I	.	.	.	.	.	.	.	.	E	P	G	T	H	V
Query Conservation											.	.														.																.	.	.									.															.	.	.	.	.	.	.	.
Alig confidence											.	.														.																.	.	.									.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	M	Q	Q	R	A	A	D	E	A	P	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	E	G	V	L	T	R	I	D	L	A	W	S	R	D	Q	K	E	K	V	Y	V	Q	D	K	L	R	E	Q	G	A	E	L	W	R	W	I	N	D	G	A	H	I
Template Known Secondary structure									T	T			S									S							T	T										T	T	S	S								T	T	S	S	S	S											T										T	T
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
		195	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Y	T	C	G	P	.	E	A	L	I	E	A	V	R	S	E	A	A	R
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		Y	V	C	G	D	A	N	R	M	A	K	D	V	E	Q	A	L	L	E
Template Known Secondary structure							T	T	T
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions