Job Description P76254 Confidence 100.00% Date Thu Jan 5 12:21:16 GMT 2012 Rank 17 Aligned Residues 217 % Identity 20% Template c1cneA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase; PDBTitle: structural studies on corn nitrate reductase: refined2 structure of the cytochrome b reductase fragment at 2.53 angstroms, its adp complex and an active site mutant and4 modeling of the cytochrome b domain Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		F	E	V	Q	V	S	Q	V	E	P	L	T	E	Q	V	K	R	F	T	L	V	A	T	D	G	K	P	L	P	A	F	T	G	G	S	H	V	I	V	Q	M	S	D	G	D	N	Q	Y	S	N	A	Y	S	L	L	S	S	P	H	D	T	S	C	Y	Q	I	A	V	R	L	E	E	N	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	C	R	L	V	A	K	K	E	L	S	R	D	V	R	L	F	R	F	S	L	P	S	P	D	Q	V	L	G	L	P	I	G	K	H	I	F	V	C	A	T	I	E	G	K	L	C	M	R	A	Y	T	P	T	S	M	V	D	E	I	G	H	F	D	L	L	V	K	V	Y	F	K	N	E	H	P	K	F	P
Template Known Secondary structure													B	T	T									S	S	T	T	S						T	T			B			B			B	T	T	B						B				S		T	T			S											S	S	S		T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		S	R	G	G	S	R	F	L	H	Q	Q	V	K	V	G	D	R	L	T	I	S	T	P	N	N	L	F	A	L	I	.	.	.	.	.	.	.	.	.	.	.	P	S	A	R	K	H	L	F	I	A	G	G	I	G	I	T	P	F	L	S	H	M	A	E	L	Q	H	S	D	.	.	.	.	V	D	W	Q	L	H
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		N	G	G	L	M	T	Q	Y	L	D	S	L	P	V	G	S	Y	I	D	V	K	G	P	L	G	H	V	E	Y	T	G	R	G	S	F	V	I	N	G	K	Q	R	N	A	R	R	L	A	M	I	C	G	G	S	G	I	T	P	M	Y	Q	I	I	Q	A	V	L	R	D	Q	P	E	D	H	T	E	M	H	L	V
Template Known Secondary structure		T											S		T	T				B							S					S	S	S					S	S	S					S								S	S		S													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		Y	C	S	R	N	P	E	S	C	A	F	R	D	E	L	V	Q	H	P	Q	A	E	K	V	H	L	H	H	S	S	T	G	T	R	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	R	L	L	A	D	I	E	P	G	T	H	V	Y	T	C	G	P	E	A	L	I	E	.	A	V
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		Y	A	N	R	T	E	D	D	I	L	L	R	D	E	L	D	R	W	A	A	E	Y	P	D	R	L	K	V	W	Y	V	I	D	Q	V	K	R	P	E	E	G	W	K	Y	S	V	G	F	V	T	E	A	V	L	R	E	H	V	P	E	G	G	D	D	T	L	A	L	A	S	G	P	P	P	M	I	Q	F	A	I
Template Known Secondary structure					S	B	T	T			T	T	S					T					S	T	T	T								S	B		S		T	T	T				S	B		S	S								T	T	S				T	T	T							S		T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	A	A	R	L	D	I	A	A	D	T	L	H	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	N	L	E	K	M	K	Y	D	M	A	N	S	F	V	V
Template Known Secondary structure		S	S					T	T			S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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