|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | H | V | I | L | L | N | A | Q | G | V | P | T | G | T | L | E | K | Y | A | A | H | T | A | D | T | R | L | H | L | A | F | S | S | W | L | F | N | A | K | G | Q | L | L | V | T | R | R | A | L | S | K | K | A | W | P | G | V | W | T | N | S | V | C | G | H | P | Q | L | G | E | S | N | E | D | A | V | I | R | R |
Query Conservation |   |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   | . |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |
|   |
|
|
|   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|   |   |
|
|
|   |   |   |
|
|   |
|
|
Template Sequence |   |
E | R | L | D | L | V | N | E | R | D | E | V | V | G | Q | I | L | R | T | D | P | A | L | R | . |
W | E | R | V | R | V | V | N | A | F | L | R | N | S | Q | G | Q | L | W | I | P | R | R | . |
. |
. |
. |
. |
. |
. |
P | N | A | L | D | V | S | V | G | G | A | V | Q | S | G | E | T | Y | E | E | A | F | R | R | E |
Template Known Secondary structure |   |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | T | T |
| T | T |
|
| . | G | G | G | S |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
| . | . | . | . | . | . | . |
|
| S | B |
|
| S |  |  |  |  |
| B | T | T |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | R | Y | E | L | G | V | E | I | T | P | P | E | S | I | Y | P | D | F | R | Y | R | A | T | D | P | S | G | I | V | E | N | E | V | C | P | V | F | A | A | R | T | T | S | A | L | Q | I | N | D | D | E | V | M | D | Y | Q | W | C | D | L | A | D | V | L | H | G | I | D | A | T | P | W | A | F | S | P | W | M | V |
Query Conservation |   |
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | R | E | E | L | N | V | E | I | D | A | L | S | W | R | P | L | A | . |
. |
. |
. |
S | F | S | P | F | Q | T | T | L | S | S | F | M | C | V | Y | E | L | R | S | D | A | T | P | I | F | N | P | N | D | I | S | G | G | E | W | L | T | P | E | H | L | L | A | R | I | A | A | G | E | A | A | K | G | D | L | A | E |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
| G | G | G | S |  |  |  |  |  |  | . | . | . | . |  |  |
| T | T | T | S | S |
| S | S |  |  |  |  |  |  |  |  |
| S | S |
|
|
|
|
| T | T | T |
| S |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |
|
| B |
| T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
164 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
M | Q |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
L | V |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
162 | . |
  |