Job Description Q46822 Confidence 97.59% Date Thu Jan 5 12:34:47 GMT 2012 Rank 82 Aligned Residues 70 % Identity 20% Template c3kvhA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:protein syndesmos; PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein) Resolution 1.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		T	L	E	K	Y	A	A	H	T	A	D	T	R	L	H	L	A	F	S	S	W	L	F	N	A	K	G	Q	.	.	.	.	.	.	.	.	.	.	.	L	L	V	T	R	R	A	L	S	K	K	A	W	P	G	V	W	T	N	S	V	C	G	H	P	Q	L	G	.	E	S	N	E	D	A	V	I	R	R	C	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.							.
Template Conservation																																																								.	.	.	.	.	.	.
Template Sequence		Q	I	S	R	V	E	A	M	R	L	G	P	G	W	S	H	S	C	H	A	M	L	Y	A	A	N	P	G	Q	L	F	G	R	I	P	M	R	F	S	V	L	M	Q	M	R	F	D	G	L	L	G	F	P	G	.	.	.	.	.	.	.	G	F	V	D	R	R	F	W	S	L	E	D	G	L	N	R	V	L	G
Template Known Secondary structure									T	T	S		T	T																		T	T	T													T	T	S					S		.	.	.	.	.	.	.					T	T	T										S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	L	G	V	E	I	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	R	L	T	E	A	D
Template Known Secondary structure		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions