Job Description Q46822 Confidence 99.66% Date Thu Jan 5 12:34:47 GMT 2012 Rank 53 Aligned Residues 133 % Identity 22% Template c3gz6A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:mutt/nudix family protein; PDBTitle: crystal structure of shewanella oneidensis nrtr complexed2 with a 27mer dna Resolution 2.90 Å

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		34	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																																		.	.
Query SS confidence									.	.	.																																		.	.
Query Sequence		A	F	S	S	W	L	F	.	.	.	N	A	K	G	Q	L	L	V	T	R	R	A	L	S	K	K	A	W	P	G	V	W	T	N	S	V	C	G	H	P	Q	L	G	.	.	E	S	N	E	D	A	V	I	R	R	C	R	Y	E	L	G	V	E	I	T	P	P	E	S	I	Y	P	D	F	R	Y	R	A	T	D
Query Conservation									.	.	.																																		.	.
Alig confidence									.	.	.															.	.										.								.	.																												.	.	.
Template Conservation																										.	.										.																																					.	.	.
Template Sequence		T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	.	.	P	F	L	G	L	W	G	L	P	.	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	.	.	.	V	G	N	N	S
Template Known Secondary structure												S	S	S										S	S	.	.	S	S	T	T					S	.						T	T	T			S														S	S			S								.	.	.				S	S
Template Predicted Secondary structure																										.	.										.																																					.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	I	V	E	N	E	V	C	P	V	F	A	A	R	T	T	S	A	L	Q	I	N	D	D	E	V	M	D	Y	Q	W	C	D	L	A	D	V	L	H	G	I	D	A	T	P	W	A	F	S	P	W	M	V	M	Q	A	T	N	R	E	A	R	K	R	L	S
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		R	D	A	R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	.	.	.	.	M	P	L	A	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L	T	Q	K	A	L
Template Known Secondary structure		S		T	T	S													S									S		S	S										T	T	.	.	.	.	S		B	S	T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions