 |
Job Description | Q46822 | Confidence | 99.72% | Date | Thu Jan 5 12:34:47 GMT 2012 |
Rank | 38 | Aligned Residues | 119 |
% Identity | 13% | Template | c3fcmA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:hydrolase, nudix family; |
PDBTitle: crystal structure of a nudix hydrolase from clostridium2 perfringens
|
Resolution | 2.20 Å |
|
 |
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
. | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
Query Sequence |   |
T | A | D | T | R | L | H | L | A | F | S | S | W | L | F | N | A | K | G | . |
Q | L | L | V | T | R | R | A | L | S | K | K | A | W | P | G | V | W | T | N | S | V | C | G | H | P | Q | L | G | E | S | N | E | D | A | V | I | R | R | C | R | Y | E | L | G | V | E | I | T | P | P | E | S | . |
. |
. |
. |
. |
I | Y |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
| . |   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   | . | . | . | . | . |   |   |
|   |   |
| . |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | D | N | T | I | A | H | L | T | S | S | A | F | A | V | N | K | E | R | N | K | F | L | X | I | H | H | N | I | Y | . |
. |
. |
. |
. |
N | S | W | A | W | T | . |
G | G | H | S | D | N | E | K | D | Q | L | K | V | A | I | K | E | L | K | E | E | T | G | V | K | N | P | T | P | L | L | D | K | A | F | A | L | D |
Template Known Secondary structure |   |
T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | T |  |  |  |
|  | . |  |  |  |
| T | T |
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S |
|  |  | S |
| S | S |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 70 | . | . | |
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | F | R | Y | R | A | T | D | P | S | G | I | V | E | N | E | V | C | P | V | F | A | A | R | T | T | S | A | L | Q | I | N | D | D | E | V | M | D | Y | Q | W | C | D | L | A | D | V | L | H | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
Template Sequence |   |
V | L | T | V | N | G | H | I | K | R | G | K | Y | V | S | S | H | L | H | L | N | L | T | Y | L | I | E | C | S | E | D | E | T | L | X | L | K | E | G | V | X | W | I | P | F | N | E | I | S | K | Y |
Template Known Secondary structure |   |
 |  |  |  |
|
|  |  |  | T | T |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S |
|
|
|
|
|
|
|  |  |  |  |  | G | G | G |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|