Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence97.46%DateThu Jan 5 11:30:02 GMT 2012
Rank280Aligned Residues171
% Identity13%Templated3rp2a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140.. .......150......... 160.........170
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Query Sequence  QQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQ. . . . . . . LSDGRKFDAKMVGKDPR. . . . . . . SDIALIQIQNP.
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Template Sequence  TEKGLRVICGGFLISRQ. . FVLTAAHCKGREITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKV
Template Known Secondary structure 
TTS
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   37..40.........50... ......60.........70.........80.........90.........100.........110....
 
   171........180.........190......... 200.........210.........220.........230 ...
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Query Sequence  . . . KNLTAIKMADSDALRVGDYTVAIGNPFGL. . . . . . . . . GETVTSGIVSALGRSGLNAENYENFIQTDAA. . . . . INR
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Template Sequence  ELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFM
Template Known Secondary structure 

BTTB






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SSTT
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GGGTTTTT


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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   234.....240.........250.........260.........270.........280..
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Query Sequence  GNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVE
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Template Sequence  GDSGGPLLC. AGVAHGIVSYGHPDAKP. . . PAIFTRVSTYVPWINAVIN
Template Known Secondary structure  TTTT
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   193......200. ........210........ .220.........230.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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