Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.16%DateThu Jan 5 11:30:02 GMT 2012
Rank147Aligned Residues86
% Identity17%Templated2cssa1
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   380.........390.........400......... 410.........420...... ...430.........440.. .......450....
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Query Sequence  LQQSSQNQVDSSSIFNGIEGAEMSNKGKDQ. GVVVNNVKTGTPAAQIG. LKKGDVIIGANQQAVK. . NIAELRKVLDSK.
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Template Sequence  ILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESK
Template Known Secondary structure 

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   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   455....460.....
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Query Sequence  . PSVLALNIQRG
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Template Sequence  SEPQVEIIVSRP
Template Known Secondary structure  G
S

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   104.....110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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