Job Description P0C0V0 Confidence 98.08% Date Thu Jan 5 11:30:02 GMT 2012 Rank 261 Aligned Residues 162 % Identity 18% Template d2bhga1 SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Viral cysteine protease of trypsin fold Resolution 1.9

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.
Predicted Secondary structure																														.						.	.																				.	.	.	.	.																		.	.
Query SS confidence																														.						.	.																				.	.	.	.	.																		.	.
Query Sequence		K	F	M	A	L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	.	T	V	I	K	V	.	.	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	.	.	.	.	.	D	I	A	L	I	Q	I	Q	N	P	K	N	L	T	A	I	K	.	.	M
Query Conservation																														.						.	.																				.	.	.	.	.																		.	.
Alig confidence																.	.													.						.	.																				.	.	.	.	.																		.	.
Template Conservation																.	.
Template Sequence		K	T	V	A	I	C	C	A	T	G	V	F	G	T	.	.	A	Y	L	V	P	R	H	L	F	A	E	K	Y	D	K	I	X	L	D	G	R	A	X	T	D	S	D	Y	R	V	F	E	F	E	I	K	V	K	G	Q	D	X	L	S	D	A	A	L	X	V	L	H	R	G	N	K	V	R	D	I	T	K	H	F
Template Known Secondary structure														B	T	.	.										T	S			S					T	T					G	G	G											S	S	S					S							S	S	S			B				G	G	G	B
Template Predicted Secondary structure																.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	.	.	.	N	L	N	G	E	L	I	G	I	N	T	A	I	L
Query Conservation																																																																	.	.	.
Alig confidence																																													.	.	.																		.	.	.													.	.
Template Conservation																																													.	.	.																																	.	.
Template Sequence		R	D	T	A	R	X	K	K	G	T	P	V	V	G	V	V	N	N	A	D	V	G	R	L	I	F	S	G	E	A	L	T	Y	K	D	I	V	V	T	X	P	G	L	.	.	.	F	A	Y	K	A	A	T	R	A	G	Y	A	G	G	A	V	L	A	K	D	G	A	D	T	F	I	V	G	T	H	S	A	.	.
Template Known Secondary structure			S	S					T	T										T	T	T										S	S									T	T		.	.	.									T	T		T	T								T	T											.	.
Template Predicted Secondary structure																																													.	.	.																																	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T	S	Q	M	V	E	Y
Query Conservation
Alig confidence		.	.	.	.														.	.
Template Conservation		.	.	.	.														.	.
Template Sequence		.	.	.	.	G	G	N	G	V	G	Y	C	S	C	V	S	R	.	.	S	X	L	Q	K	X	K	A	H
Template Known Secondary structure		.	.	.	.			T	T										.	.
Template Predicted Secondary structure		.	.	.	.														.	.
Template SS confidence
						184	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions