Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence95.52%DateThu Jan 5 11:30:02 GMT 2012
Rank326Aligned Residues168
% Identity18%Templated1xx9a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140... ......150.........160 .........170..
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Query Sequence  LGSGVIIDADKGYVVTNNHVVDNATVIKVQL. . . . . . . . . . . . SDGRKFDAKMVGKDPRS. . . . . . . DIALIQIQNPKN.
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Template Sequence  LCGGSIIGNQ. . WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY
Template Known Secondary structure  TT..
GGGGTT
S
GGGS
SBGGG

TT



TT
S
TTTS


SS



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   3940........ .50.........60.........70.........80.........90.........100.........110......
 
   173......180.........190.........200.........210. ........220.........230...
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Query Sequence  . . . . . LTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSAL. . . . . . . . . . . . . . GRSGLNAENYENFIQTDAAINR
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Template Conservation                                                                                  
Template Sequence  TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK
Template Known Secondary structure  BTTB


B


TT
TT


S
S

SSTT



SB



TTTS


TT

TT


B

T
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   234.....240..... ....250.........260.........270.........280..
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Query Sequence  GNSGGALVNLNG. . . ELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVE
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Template Sequence  GDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKTQA
Template Known Secondary structure  T
TT
TT
SSSS
TT


GGGG

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   193......200.........210.........220.........230.........240....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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