Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.09%DateThu Jan 5 11:30:02 GMT 2012
Rank187Aligned Residues77
% Identity19%Templated1wi4a1
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410.........420...... ...430.........440.. .......450.... .....460
Predicted Secondary structure 
























.








..

....

Query SS confidence 






































.















. .











. . . .





Query Sequence  VDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG. LKKGDVIIGANQQAVK. . NIAELRKVLDSK. . . . PSVLAL
Query Conservation          
     
       

 
  
  

 
   
.
  

 

 


  
 ..
       
   ....   
 
Alig confidence 






































.















..











....





Template Conservation        


  
 
         
 
  
  

 
   
 
  

 

 


  
   
  

  


           
Template Sequence  TVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEI
Template Known Secondary structure 

SS



SSSSS
SS
TTS
S

TT
BTTS

TT

S

SSSS
Template Predicted Secondary structure 










































Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   461...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  NIQR
Query Conservation   
 
Alig confidence 



Template Conservation     
Template Sequence  AFIR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions