 |
Job Description | P0C0V0 | Confidence | 99.05% | Date | Thu Jan 5 11:30:02 GMT 2012 |
Rank | 205 | Aligned Residues | 88 |
% Identity | 17% | Template | d1vaea_ |
SCOP info | PDZ domain-like
| PDZ domain-like
| PDZ domain
|
Resolution | UNK |
|
 |
  |   |
371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | |
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . | . |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
G | K | Q | V | N | V | N | L | E | L | Q | Q | S | S | Q | N | Q | V | D | S | S | S | I | F | N | G | I | E | G | A | E | M | S | N | K | G | K | D | Q | G | V | V | V | N | N | V | K | T | G | T | P | A | A | Q | I | G | L | K | K | G | D | V | I | I | G | A | N | Q | Q | A | V | K | . |
. |
N | I | A | E | L | R |
Query Conservation |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   | . | . |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |
|
|   |
|   | . | . | . | . | . | . |
|   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |
Template Sequence |   |
G | S | S | G | S | A | S | K | R | W | S | P | P | R | G | I | H | F | T | V | E | E | G | D | L | G | F | T | L | R | . |
. |
. |
. |
. |
. |
G | N | T | P | V | Q | V | H | F | L | D | P | H | C | S | A | S | L | A | G | A | K | E | G | D | Y | I | V | S | I | Q | G | V | D | C | K | W | L | T | V | S | E | V | M |
Template Known Secondary structure |   |
|
| S |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |
|
| S | S |
|
| S |
|
|  |  | . | . | . | . | . | . | S | S | S | S |
|  |  |
|
|
|
| T | T | S | S |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| S | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
449 | 450 | . | . | . | . | |
. | . | . | . | . | 460 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | L | D | S | K | . |
P | S | V | L | A | L | N | I | Q | R |
Query Conservation |   |
  |   |
|   |   |   | . |   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
Template Sequence |   |
K | L | L | K | S | F | G | G | E | E | V | E | M | K | V | V | S |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|