 |
Job Description | P0C0V0 | Confidence | 99.03% | Date | Thu Jan 5 11:30:02 GMT 2012 |
Rank | 214 | Aligned Residues | 69 |
% Identity | 17% | Template | d1uepa_ |
SCOP info | PDZ domain-like
| PDZ domain-like
| PDZ domain
|
Resolution | UNK |
|
 |
  |   |
396 | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | |
|
. | . | . | . | . | . | . | 450 | . | . | . | . | |
|
. | . | . | . | . | 460 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | E | G | A | E | M | S | N | K | G | K | D | Q | G | V | V | V | N | N | V | K | T | G | T | P | A | A | Q | I | G | . |
L | K | K | G | D | V | I | I | G | A | N | Q | Q | A | V | K | . |
. |
N | I | A | E | L | R | K | V | L | D | S | K | . |
. |
P | S | V | L | A | L | N | I | Q | R |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|   |   |   |
| . |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   | . | . |
|   |   |   |   |   |   |   |
|   |   |   | . | . |   |   |   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
G | F | G | F | R | I | L | G | G | D | E | P | G | Q | P | I | L | I | G | A | V | I | A | M | G | S | A | D | R | D | G | R | L | H | P | G | D | E | L | V | Y | V | D | G | I | P | V | A | G | K | T | H | R | Y | V | I | D | L | M | H | H | A | A | R | N | G | Q | V | N | L | T | V | R | R |
Template Known Secondary structure |   |
S |
|
|  |  |  |
|
|
|
| S | T | T | S |
|
| B |  |  |  |  |
| T | T | S | T | T | G | G | G | T |
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|