Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.26%DateThu Jan 5 11:30:02 GMT 2012
Rank90Aligned Residues94
% Identity16%Templated1q7xa_
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400.........410.........420...... ...430......
Predicted Secondary structure 







































.




Query SS confidence 




































































.









Query Sequence  PVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIG. LKKGDVIIGA
Query Conservation    
  
 
 
 
 
      
 
               
     
       

 
  
  

 
   
.
  

 

 
Alig confidence 


























...............


























.









Template Conservation         
 
 
    

  
      ............... 
         
 
  
  

 
   
 
  

 

 
Template Sequence  KPGDIFEVELAKNDNSLGISVTVLFDK. . . . . . . . . . . . . . . GGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAV
Template Known Secondary structure 
SSSSSS
S

SSSSSS...............B
B
TTSSS


B
TTSTT


SS
Template Predicted Secondary structure 













...............





















Template SS confidence 















































































   6...10.........20.........30.. .......40.........50.........60.........70
 
   437..440.. .......450.........460......
Predicted Secondary structure 



..





Query SS confidence 





. .























Query Sequence  NQQAVK. . NIAELRKVLDSKPSVLALNIQRGD
Query Conservation 

  
 ..
       
      
 
 
 
 
Alig confidence 





..























Template Conservation 

  
       
   
      
 
 
 
  
Template Sequence  NGVSLEGATHKQAVETLRNTGQVVHLLLEKGQ
Template Known Secondary structure  TT
BS
TTSTTS


Template Predicted Secondary structure 












Template SS confidence 































   71........80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions