Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence21.19%DateThu Jan 5 11:30:02 GMT 2012
Rank479Aligned Residues90
% Identity10%Templated1p42a1
SCOP infoRibosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   360.........370.........380.........390.........400.........410.........420.........430.........
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  GSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQ
Query Conservation 
  
 
 
 
 
      
 
               
     
       

 
  
  

 
   

  

 

 


 
Alig confidence 
























.....





























.


















Template Conservation 
  
 
 
 

   


 
 
 
  .....
 
    
  
   
 
      
 




.



  




  




 
Template Sequence  GEYSKLIIHPEKEGTGIRFFKNGVY. . . . . IPARHEFVVHTNHSTDLGFKGQRIKTVEHI. LSVLHLLEITNVTIEVIGN
Template Known Secondary structure 



TT

TT.....SSGGG
SSS
TTB

.TT

SSS
Template Predicted Secondary structure 








.....










.






Template SS confidence 















































































   21........30.........40..... ....50.........60.........70..... ....80.........90....
 
   440.. .......450.....
Predicted Secondary structure 

....


Query SS confidence 


. . . .












Query Sequence  AVK. . . . NIAELRKVLDSKP
Query Conservation   
 ....
       
    
Alig confidence 


....












Template Conservation 








  

  
  

Template Sequence  EIPILDGSGWEFYEAIRKNI
Template Known Secondary structure  B


TTSSSTT
Template Predicted Secondary structure 






Template SS confidence 



















   100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions