Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.10%DateThu Jan 5 11:30:02 GMT 2012
Rank180Aligned Residues92
% Identity24%Templated1mfga_
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
Resolution1.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380.........390.........400.........410.........420.........430.........440.. .......450..
Predicted Secondary structure 








































..
Query SS confidence 



































































. .









Query Sequence  NVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK. . NIAELRKVLD
Query Conservation     
 
               
     
       

 
  
  

 
   

  

 

 


  
 ..
       
 
Alig confidence 





.











































.















..









Template Conservation    

 
.       


 
 
               
 
  
  

 
   .
  

 

 


  
       

  

Template Sequence  SMEIRV. RVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKL. LQPGDKIIQANGYSFINIEHGQAVSLLK
Template Known Secondary structure  .
SSS
S
BTS


SSSTT



TTSTTTTT.

TT
TT
TT
B
Template Predicted Secondary structure 
.

























.











Template SS confidence 















































































   1278.1280... ......1290.........1300.........1310.........1320....... ..1330.........1340.........1350.....
 
   453......460........
Predicted Secondary structure 




Query SS confidence 















Query Sequence  SKPSVLALNIQRGDST
Query Conservation       
 
 
 
 
  
Alig confidence 















Template Conservation       
 
 
 
   
Template Sequence  TFQNTVELIIVREVSS
Template Known Secondary structure 

S


Template Predicted Secondary structure 






Template SS confidence 















   1356...1360.........1370.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions