Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.31%DateThu Jan 5 11:30:02 GMT 2012
Rank72Aligned Residues81
% Identity22%Templated1fc6a3
SCOP infoPDZ domain-like PDZ domain-like Tail specific protease PDZ domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410.........420.........430.........440.. .......450.. .......460.......
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Query Sequence  SSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK. . NIAELRKVLD. SKPSVLALNIQRGDS
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Template Sequence  AGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGXSLYDVSDLLQGEADSQVEVVLHAPGA
Template Known Secondary structure 

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TTSTT

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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   468.470.
Predicted Secondary structure 
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Query Sequence  TIYL
Query Conservation     
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Template Conservation      
Template Sequence  PSNT
Template Known Secondary structure 
Template Predicted Secondary structure 


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   237..240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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