Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence96.64%DateThu Jan 5 11:30:02 GMT 2012
Rank304Aligned Residues166
% Identity22%Templated1eq9a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140... ......150...... ...160.........170 ..
Predicted Secondary structure 








.........



.......







....

Query SS confidence 






























. . . . . . . . .












. . . . . . .













. . . .

Query Sequence  LGSGVIIDADKGYVVTNNHVVDNATVIKVQL. . . . . . . . . SDGRKFDAKMVGK. . . . . . . DPRSDIALIQIQNP. . . . KN
Query Conservation   


 

  
 
 



 


     
 
  ......... 

    
 

  .......
   






   ....  
Alig confidence 









..


















.........












.......













....

Template Conservation   
 




  .. 







                                                           
Template Sequence  RCGASILDNN. . NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL
Template Known Secondary structure 
SSS..
TT
S
GGGS
SBTTS


TT
BTTTTB


SS



BTT
Template Predicted Secondary structure 


..







































Template SS confidence 















































































   41........50 .........60.........70.........80.........90.........100.........110........
 
   173......180.........190......... 200.........210.........220......... 230.........240
Predicted Secondary structure 


















........












....






Query SS confidence 


























. . . . . . . .





























. . . .










Query Sequence  LTAIKMADSDALRVGDYTVAIGNPFGL. . . . . . . . GETVTSGIVSALGRSGLNAENYENFIQTDA. . . . AINRGNSGGAL
Query Conservation 
    
        
  
 
 
 
 
 ........      
 

   
           
  

.... 
  






Alig confidence 


























........





























....










Template Conservation                                                                            
 
 

Template Sequence  VQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPL
Template Known Secondary structure  B



S

TT
TTS


SSTT



SB

SSS

TT


TT
B

TT
TT
Template Predicted Secondary structure 










































Template SS confidence 















































































   118.120.........130.........140.........150.........160.........170.........180.........190.......
 
   241........250.........260.........270.........280...
Predicted Secondary structure 










Query SS confidence 










































Query Sequence  VNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEY
Query Conservation      
 



               



          
   
Alig confidence 
.





















..
















Template Conservation   .    
 

 
 
  
    
 
..

 
  
  

   
  
Template Sequence  V. ANGAQIGIVSFGSPCALGEPDV. . YTRVSSFVSWINANLKK
Template Known Secondary structure  .TT
STTTSSS
..GGGGTS

Template Predicted Secondary structure  .










..

Template SS confidence 










































   200 .........210.........220.. .......230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions