Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence94.81%DateThu Jan 5 11:30:02 GMT 2012
Rank331Aligned Residues164
% Identity15%Templated1elva1
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150....... ..160.........170
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Query Sequence  LGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKD. . . . . . . . . . . . . . . . . PRSDIALIQIQNP. . . . .
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Template Sequence  WAGGALINEY. . WVLTAAHVVEGNREPTMYVGSTSVQKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGP
Template Known Secondary structure  TT..
TT
SS


S
SB




TTS


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TT



TT

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BT
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   444.....450... ......460.........470.........480.........490.........500.........510.........520.
 
   171........180.........190..... ....200.........210.........220........ .230.......
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Query Sequence  . KNLTAIKMADSDALRVGDYTVAIGN. . . . . . . . PFGLGETVTSGIVSALGRSGLNAENYENFIQTD. . . . AAINRGNSG
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Template Conservation        
                                                                        
Template Sequence  TVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVAYVFTPNMICAGGEKGMDSCKGDSG
Template Known Secondary structure  TB


B


SSGGG


TT
S


SS
SS
SB

T





TT
STT
B

TT
TT
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   529530.........540.........550.........560.........570.........580.........590.........600........
 
   238.240...... ...250.........260.........270.........280..
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Query Sequence  GALVNLNGE. . . . . . LIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVE
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Template Sequence  GAFAVQDPNDKTKFYAAGLVSWGPQCGT. . . . YGLYTRVKNYVDWIMKTMQ
Template Known Secondary structure 

SS
TT

SSTTS....GGGG
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   619620.........630.........640...... ...650.........660.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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