Job Description P0C0V0 Confidence 93.79% Date Thu Jan 5 11:30:02 GMT 2012 Rank 342 Aligned Residues 168 % Identity 13% Template d1brup_ SCOP info Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Resolution 2.30

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.	.	.	.	.	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	V	I	K	V	Q	L	.	.	.	.	.	.	.	.	.	S	D	G	R	K	F	D	A	K	M	V	G	K	.	.	.	.	.	.	.	.	.	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence												.	.																				.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation												.	.
Template Sequence		T	C	G	G	T	L	V	D	Q	S	.	.	W	V	L	T	A	A	H	C	I	S	S	S	R	T	Y	R	V	V	L	G	R	H	S	L	S	T	N	E	P	G	S	L	A	V	K	V	S	K	L	V	V	H	Q	D	W	N	S	N	Q	L	S	N	G	N	D	I	A	L	L	K	L	A	S	P	V	S	L	T
Template Known Secondary structure										T	T	.	.						G	G	G			T	T	S							S		S	B	S	S	S			T	T													T	T			T	T		G	G	G										S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230												.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	.	.	.	.	.	.	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	.	.	.	.	.	.	.	.	.	.	.	I	N	R
Query Conservation																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	I	Q	L	G	C	L	P	A	A	G	T	I	L	P	N	N	Y	V	C	Y	V	T	G	W	G	R	L	Q	T	N	G	A	S	P	D	I	L	Q	Q	G	Q	L	L	V	V	D	Y	A	T	C	S	K	P	G	W	W	G	S	T	V	K	T	N	M	I	C	A	G	G	D	G	I	I	S	S	C	N	G
Template Known Secondary structure		S	S					B				T	T					T	T								S			S	S	T	T	S				S	B															T	S	T	T	T	T	G	G	G			T	T							S	S	S	S	B			T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure														.	.	.																				.
Query SS confidence														.	.	.																				.
Query Sequence		G	N	S	G	G	A	L	V	N	L	N	G	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	.	G	F	A	I	P	S	N	M	V	K	N	L	T	S	Q	M	V	E
Query Conservation														.	.	.																				.
Alig confidence														.	.	.																				.
Template Conservation
Template Sequence		D	S	G	G	P	L	N	C	Q	G	A	N	G	Q	W	Q	V	H	G	I	V	S	F	G	S	S	L	G	C	N	Y	Y	H	K	P	S	V	F	T	R	V	S	N	Y	I	D	W	I	N	S	V	I	A
Template Known Secondary structure			T	T								T	T	S												B	T	T	B	S	S		T	T								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions