Job Description P0C0V0 Confidence 99.87% Date Thu Jan 5 11:30:02 GMT 2012 Rank 32 Aligned Residues 147 % Identity 16% Template c3r0hA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide Resolution 2.60 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																							.																				.	.
Query SS confidence																							.																				.	.
Query Sequence		D	A	Q	R	G	A	F	V	S	Q	V	L	P	N	S	S	A	A	K	A	G	.	I	K	A	G	D	V	I	T	S	L	N	G	K	P	I	S	S	F	A	.	.	A	L	R	A	Q	V	G	T	M	P	V	G	S	K	L	T	L	G	L	L	R	D	G	K	Q	V	N	V	N	L	E	L	Q	Q	S	S	Q
Query Conservation																							.																				.	.
Alig confidence																							.																				.	.
Template Conservation
Template Sequence		H	V	T	T	G	C	V	I	T	H	V	Y	P	E	G	Q	V	A	A	D	K	R	L	K	I	F	D	H	I	C	D	I	N	G	T	P	I	H	V	G	S	M	T	T	L	K	V	H	Q	L	F	H	T	T	Y	E	K	A	V	T	L	T	V	F	R	A	D	P	P	E	L	E	K	F	N	V	D	L	M	K
Template Known Secondary structure		S			S									T	T	S										T	T							T	T					G	G	G	S											S			S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure																																											.																	.	.
Query SS confidence																																											.																	.	.
Query Sequence		N	Q	V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I
Query Conservation																																											.																	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																											.																	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		K	A	G	K	E	L	.	.	.	.	.	.	.	.	.	G	L	S	L	S	P	N	E	I	G	C	T	I	A	D	L	I	Q	G	Q	Y	P	E	I	D	S	K	L	Q	R	G	D	I	I	T	K	F	N	G	D	A	L	E	G	L	P	F	Q	V	C	Y	A	L	F	K	G	A	N	G	K	V	S	M	E	V
Template Known Secondary structure			T	T				.	.	.	.	.	.	.	.	.								S	S									T	T	S										T	T							T	T				T	T												T			S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		590	.	.	.	.	.										.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		463	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		661	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions