Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence99.06%DateThu Jan 5 11:30:02 GMT 2012
Rank202Aligned Residues74
% Identity27%Templatec3qikA_
PDB info PDB header:hydrolase regulatorChain: A: PDB Molecule:phosphatidylinositol 3,4,5-trisphosphate-dependent rac PDBTitle: crystal structure of the first pdz domain of prex1
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   388.390.........400.........410.........420.........430.........440.. .......450... ......460..
Predicted Secondary structure 

































..
...


Query SS confidence 






















































. .










. . .








Query Sequence  VDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVK. . NIAELRKVLDS. . . KPSVLALNI
Query Conservation          
     
       

 
  
  

 
   

  

 

 


  
 ..
       
  ...    
 
 
Alig confidence 













.....



































..










...








Template Conservation        
 

 
  .....      
  
  



   

  

 

 


  
      

  


    
   
 


Template Sequence  ILPQEEDYGFDIEE. . . . . KNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV
Template Known Secondary structure 


SSSSS.....TT
TTST

TT
BTTSTTS
TT

Template Predicted Secondary structure 






.....


























Template SS confidence 















































































   628.630.........640. ........650.........660.........670.........680.........690.........700..
 
   463...
Predicted Secondary structure 

Query SS confidence 



Query Sequence  QRGD
Query Conservation   
 
Alig confidence 



Template Conservation    
 
Template Sequence  ATKA
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 



   703...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions