Job Description P0C0V0 Confidence 99.26% Date Thu Jan 5 11:30:02 GMT 2012 Rank 93 Aligned Residues 90 % Identity 23% Template c3qglD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:sorting nexin-27; PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3 Resolution 3.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	L	G	L	L	R	D	G	K	Q	V	N	V	N	L	E	L	Q	Q	S	S	Q	N	Q	V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.
Query Conservation																																																																																	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																																																	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	R	I	V	K	S	E	S	G	Y	G	F	N	V	R	G	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	E	G	G	Q	L	R	S	I	N	G	E	L	Y	A	P	L	Q	H	V	S	A	V	L	P	G	G	A	A	D	R	A	G	V	R	K	G	D	R	I	L	E	V	N	G	V	N	V	E	G
Template Known Secondary structure								B	T	T	B									S	S	.	.	.	.	.	.	.	.	.	.	.	S								T	T				S										T	T	S	T					T			T	T							T	T				T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60												.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
			443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	T	H	K	Q	V	V	D	L	I	R	A	G	E	K	E	L	I	L	T	V	L	S
Template Known Secondary structure															S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions