Job Description P0C0V0 Confidence 100.00% Date Thu Jan 5 11:30:02 GMT 2012 Rank 5 Aligned Residues 280 % Identity 52% Template c3pv4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:degq; PDBTitle: structure of legionella fallonii degq (delta-pdz2 variant) Resolution 3.10 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	L	A	P	M	L	E	K	V	M	P	S	V	V	S	I	N	V	E	G	S	T	T	V	N	T	P	R	M	P	R	N	F	Q	Q	F	F	G	D	D	S	P	F	C	Q	E	G	S	P	F	Q	S	S	P	F	C	Q	G	G	Q	G	G	N	G	G	G	Q	Q	Q	K	F	M	A	L	G	S	G	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	P	S	M	A	P	V	L	K	N	I	M	P	A	I	V	N	V	A	V	Q	G	Y	L	P	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	E	S	I	G	S	G	V
Template Known Secondary structure					S								S	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																																													.	.	.	.	.	.	.	40	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		I	I	D	P	N	N	G	V	I	I	T	N	D	H	V	I	R	N	A	S	L	I	T	V	T	L	Q	D	G	R	R	L	K	A	R	L	I	G	G	D	S	E	T	D	L	A	V	L	K	I	.	D	A	K	N	L	K	S	L	V	I	G	D	S	D	K	L	E	V	G	D	F	V	V	A	I	G	N	P	F
Template Known Secondary structure					T	T	T	T						T	T	T	S	T	T	B	S							S	S	S				B								G	G	G	T							.			S	S						B			G	G	G			T	T										S
Template Predicted Secondary structure																																																				.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.							.	.	.	.																									.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.							.	.	.	.																									.	.	.	.	.	.
Template Sequence		G	L	S	Q	S	A	T	F	G	I	V	S	A	L	K	N	.	.	.	.	.	.	.	.	.	.	F	I	Q	T	D	A	.	.	.	.	A	I	S	G	G	A	L	V	N	A	K	G	E	L	I	G	I	N	T	A	I	L	V	G	.	.	.	.	.	.	I	G	F	A	I	P	I	N	M	V	K	D	V	A
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.					S	S	.	.	.	.					S					T	T														.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.							.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.											.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		S	Q	M	V	E	Y	G	Q	V	K	R	G	E	L	G	I	M	G	T	E	L	N	S	E	L	A	K	A	M	K	V	D	A	Q	.	R	G	A	F	V	S	Q	V	L	P	N	S	S	A	A	K	A	G	I	K	A	G	D	V	I	T	S	L	N	G	K	P	I	S	S	F	A	A	L	R	A	Q	V	G	T
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		Q	Q	I	I	K	F	G	S	I	H	R	G	L	M	G	I	F	V	Q	H	L	T	P	E	L	A	Q	A	M	G	Y	P	E	D	F	Q	G	A	L	V	S	Q	V	N	P	N	S	P	A	E	L	A	G	L	K	A	G	D	I	I	T	Q	I	N	D	T	K	I	T	Q	A	T	Q	V	K	T	T	I	S	L
Template Known Secondary structure							S	S						S	T	T														T	T			S	S											T	T						T	T			T	T							T	T					S	T	T								T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	V	G	S	K	L	T	L	G	L	L	R	D	G	K	Q	V	N	V	N	L	E	L	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	G	S	T	V	K	I	I	V	E	R	D	N	K	P	L	T	L	S	A	V	V	T	D
Template Known Secondary structure		S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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