Job Description P0C0V0 Confidence 99.95% Date Thu Jan 5 11:30:02 GMT 2012 Rank 21 Aligned Residues 183 % Identity 20% Template c3mmgB_ PDB info PDB header:viral protein, hydrolase Chain: B: PDB Molecule:nuclear inclusion protein a; PDBTitle: crystal structure of tobacco vein mottling virus protease Resolution 1.70 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	V	M	P	S	V	V	S	I	N	V	E	G	S	T	T	V	N	T	P	R	M	P	R	N	F	Q	Q	F	F	G	D	D	S	P	F	C	Q	E	G	S	P	F	Q	S	S	P	F	C	Q	G	G	Q	G	G	N	G	G	G	Q	Q	Q	K	F	M	A	L	G	S	G	V	I	I	D	A	D	K	G	Y
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.		.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.		.
Template Sequence		N	P	I	S	A	C	V	C	L	L	E	N	S	S	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	E	R	L	F	G	I	G	F	.	.	G	.	P	Y
Template Known Secondary structure						T	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	T	.	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.		.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																																																	.	.	30	.	.	.	.	.	.	.			.		.	40
		126	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.																					.	.	.	.
Query SS confidence										.																					.	.	.	.
Query Sequence		V	V	T	N	N	H	V	V	.	D	N	A	T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	.	.	.	.	V	G	K	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	G
Query Conservation										.																					.	.	.	.
Alig confidence										.																					.	.	.	.															.																															.	.
Template Conservation																																																	.																															.	.
Template Sequence		I	I	A	N	Q	H	L	F	R	R	N	N	G	E	L	T	I	K	T	M	H	G	E	F	A	V	A	N	S	T	Q	L	Q	M	K	P	V	E	G	R	D	I	I	V	I	K	M	.	A	K	D	F	P	P	F	P	Q	K	L	K	F	R	Q	P	T	I	K	D	R	V	C	M	V	S	T	N	F	Q	.	.
Template Known Secondary structure						G	G	G	G	S	S			S							T	T						S		G	G	G	S						T	B	S	S							.		T	T	S					S				B					T	T										S	S	.	.
Template Predicted Secondary structure																																																	.																															.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																											.
Query SS confidence																				.																											.
Query Sequence		E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	.	E	N	Y	E	N	F	I	Q	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	.	G	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T	S
Query Conservation																				.																											.
Alig confidence		.	.	.																.																											.												.	.
Template Conservation		.	.	.																																																							.	.
Template Sequence		.	.	.	Q	K	S	V	S	S	L	V	S	E	S	S	H	I	V	H	K	E	D	T	S	F	W	Q	H	W	I	T	T	K	D	G	Q	A	G	S	P	L	V	S	I	I	D	G	N	I	L	G	I	H	S	L	T	H	.	.	T	T	N	G	S	N	Y	F	V	E	F	P	E	K	F	V	A	T	Y	L	D
Template Known Secondary structure		.	.	.		G	G	G								B						T	T	S	S										T	T		T	T						T	T	T												.	.	T	T	T										T	T						T	S
Template Predicted Secondary structure		.	.	.																																																							.	.
Template SS confidence
					118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		279	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	V	E	Y	G	Q	V	K	R	G	E
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		A	A	D	G	.	.	.	W	C	K	N	W
Template Known Secondary structure				S	S	.	.	.		B	S	S
Template Predicted Secondary structure						.	.	.
Template SS confidence
		193	.	.	.				.	.	.	200	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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