Job Description P0C0V0 Confidence 98.29% Date Thu Jan 5 11:30:02 GMT 2012 Rank 253 Aligned Residues 167 % Identity 16% Template c3h7tB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:group 3 allergen smipp-s yvt004a06; PDBTitle: crystal structure of scabies mite inactivated protease paralogue s-d12 (smipp-s-d1) Resolution 2.00 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	V	I	K	V	Q	L	.	.	.	.	.	.	.	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	.	.	.	.	.	.	.	R	S	D	I	A	L	I	Q	I	Q	N	P	K	N	L	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.																.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence												.	.																				.	.	.	.	.	.	.																.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation												.	.
Template Sequence		F	C	G	G	S	I	L	T	A	N	.	.	F	V	I	T	A	A	Q	C	V	D	G	T	K	P	S	D	I	S	I	H	Y	G	S	S	Y	R	T	T	K	G	T	S	V	M	A	K	K	I	Y	I	V	R	Y	H	P	L	T	M	Q	N	N	Y	A	V	I	E	T	E	M	P	I	K	L	D	D	K	T	T
Template Known Secondary structure								S	S	S	S	.	.										T	T			G	G	G						S		S	B	S	S	S	S	S												S		B	T	T	T	T	B	T								S	S						S	S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.													.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	.	.	.	.	.	.	.	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	I	N	R	G
Query Conservation																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	I	E	L	P	S	L	L	Y	D	P	E	P	D	T	S	V	L	V	S	G	W	G	S	T	N	F	K	S	L	E	Y	S	G	D	L	M	E	A	N	F	T	V	V	D	R	K	S	C	E	E	Q	Y	K	Q	I	E	A	D	K	Y	I	Y	D	G	V	F	C	A	G	G	E	E	T	Y	I	G	Y	G
Template Known Secondary structure					B				T	T					T	T											S	S	T	T						S	B																				T	T	T		G	G	G		S	T	T										B			T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	G	A	L	V	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T	S	Q	M	V	E	Y	G
Query Conservation
Alig confidence										.																						.	.
Template Conservation										.																						.	.
Template Sequence		D	A	G	D	P	A	V	Q	.	N	G	T	L	V	G	V	A	S	Y	I	S	S	M	P	S	E	F	P	S	V	.	.	F	L	R	V	G	Y	Y	V	L	D	I	K	D	I	I	S	G	K
Template Known Secondary structure			T	T						.	T	T										T	T			T	T	S				.	.																T	T
Template Predicted Secondary structure										.																						.	.
Template SS confidence
		185	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions