Job Description P0C0V0 Confidence 95.52% Date Thu Jan 5 11:30:02 GMT 2012 Rank 325 Aligned Residues 167 % Identity 17% Template c3govB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:masp-1; PDBTitle: crystal structure of the catalytic region of human masp-1 Resolution 2.55 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																																	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		F	C	G	G	S	L	L	G	S	S	.	.	W	I	V	T	A	A	H	C	L	H	Q	S	L	D	P	K	D	P	T	L	R	D	S	D	L	L	S	P	S	D	F	K	I	I	L	G	K	H	W	R	L	R	S	D	E	N	E	Q	H	L	G	V	K	H	T	T	L	H	P	Q	Y	D	P	N	T	F	E	N
Template Known Secondary structure									T	T	T	.	.						G	G	G	G	B					T	T	S					G	G	G	B			G	G	G						S			B	S	S	S			S	S													T	T		B	T	T	T	T	B	T
Template Predicted Secondary structure												.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		161	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																.	.	.	.	.	.	.	220	.
Predicted Secondary structure												.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	A	L	I	Q	I	Q	N	P	.	.	.	.	K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	G	L	N	A	E	N	Y
Query Conservation												.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	L	V	E	L	L	E	S	P	V	L	N	A	F	V	M	P	I	C	L	P	E	G	P	Q	Q	E	G	A	M	V	I	V	S	G	W	G	K	Q	F	L	Q	R	F	P	E	T	L	M	E	I	E	I	P	I	V	D	H	S	T	C	Q	K	A	Y	A	P	L	K	K	K	V	T	R	D	M	I	C
Template Known Secondary structure									S	S					S	S	S					B			S	S				T	T									S			T	T	S				S	B																		T	T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		E	N	F	I	Q	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	G	E	.	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T	S	Q	M	V	E
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.											.
Template Conservation																																										.
Template Sequence		A	G	E	K	E	G	G	K	D	A	C	A	G	D	S	G	G	P	M	V	T	L	N	R	E	R	G	Q	W	Y	L	V	G	T	V	S	W	G	D	D	.	C	G	K	K	D	R	Y	G	V	Y	S	Y	I	H	H	N	K	D	W	I	Q	R	V	T	G
Template Known Secondary structure			S		T	T				B			T	T		T	T								T	T	T													S	S	.	S	S		S	S								T	T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.		.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions