Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence97.00%DateThu Jan 5 11:30:02 GMT 2012
Rank292Aligned Residues165
% Identity13%Templatec3fzzB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:granzyme c; PDBTitle: structure of grc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140... ......150.........160 .........170.. .
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Query Sequence  LGSGVIIDADKGYVVTNNHVVDNATVIKVQL. . . . . . . SDGRKFDAKMVGKDPRS. . . . . . . DIALIQIQNPKN. . . . . L
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Template Sequence  FCGGFLVRDK. . FVLTAAHCKGRSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVR
Template Known Secondary structure  TT..
TT


S
SBTTS

TT

TT
BTTTTBT

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BTTB
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   4950........ .60.........70.........80.........90.........100.........110.........120......
 
   174.....180.........190.........200.........210... ......220.........230........
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Query Sequence  TAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR. . . . . . . . . . . . . . . SGLNAENYENFIQTDAAINRGNSGG
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Template Sequence  PLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDSGG
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TT



TT
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SSTTS


SB
B

TTT

TTT


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B

TTTTTT
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   239240.........250.........260.........270.........280...
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Query Sequence  ALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEY
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Template Sequence  PLVC. KRAAAGIVSYGQTDGSA. . . PQVFTRVLSFVSWIKKTMKH
Template Known Secondary structure  .TT

TT
SS...SGGGTT
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   207..210 .........220....... ..230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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