Job Description P0C0V0 Confidence 99.19% Date Thu Jan 5 11:30:02 GMT 2012 Rank 129 Aligned Residues 86 % Identity 17% Template c3b76A_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor Resolution 1.75 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																															.																				.																	.	.
Query SS confidence																															.																				.																	.	.
Query Sequence		E	L	Q	Q	S	S	Q	N	Q	V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	.	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K
Query Conservation																															.																				.																	.	.
Alig confidence																															.																				.																	.	.
Template Conservation
Template Sequence		S	M	H	E	K	V	V	N	I	Q	K	D	P	G	E	S	L	G	M	T	V	A	G	G	A	S	H	R	E	W	D	L	P	I	Y	V	I	S	V	E	P	G	G	V	I	S	R	D	G	R	I	K	T	G	D	I	L	L	N	V	D	G	V	E	L	T	E	V	S	R	S	E	A	V	A	L	L	K	R	T
Template Known Secondary structure														T	T											S		S	T	T												T	T	S							S	S		T	T							T	T			G	G	G	S											S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	V	L	A	L	N	I	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	S	I	V	L	K	A	L	E
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions