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Job Description | P0C0V0 | Confidence | 99.09% | Date | Thu Jan 5 11:30:02 GMT 2012 |
Rank | 189 | Aligned Residues | 76 |
% Identity | 18% | Template | c2yt7A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family |
PDBTitle: solution structure of the pdz domain of amyloid beta a42 precursor protein-binding family a member 3
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Resolution | UNK |
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389 | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | S | S | S | I | F | N | G | I | E | G | A | E | M | S | N | K | G | K | D | Q | G | V | V | V | N | N | V | K | T | G | T | P | A | A | Q | I | G | . |
L | K | K | G | D | V | I | I | G | A | N | Q | Q | A | V | K | . |
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N | I | A | E | L | R | K | V | L | D | S | K | P | S | V | L | A | L | N | I | Q | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | R | R | G | E | G | L | G | V | A | L | V | E | S | G | W | G | S | L | L | P | T | A | V | I | A | N | L | L | H | G | G | P | A | E | R | S | G | A | L | S | I | G | D | R | L | T | A | I | N | G | T | S | L | V | G | L | P | L | A | A | C | Q | A | A | V | R | E | T | K | S | Q | T | S | V | T | L | S | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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