Job Description P0C0V0 Confidence 99.85% Date Thu Jan 5 11:30:02 GMT 2012 Rank 34 Aligned Residues 156 % Identity 20% Template c2xkxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:disks large homolog 4; PDBTitle: single particle analysis of psd-95 in negative stain Resolution 22.9 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	A	Q	R	G	A	F	V	S	Q	V	L	P	N	S	S	A	A	K	A	G	.	I	K	A	G	D	V	I	T	S	L	N	G	K	P	I	S	S	F	A	A	L	R	A	Q	V	G	T	M	P	V	G	S	K	L	T	L	G	L	L	R	D	G	K	Q	V	N	V	N	L	E	L	Q	Q	S	S	Q	N	Q
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		G	D	D	P	S	I	F	I	T	K	I	I	P	G	G	A	A	A	Q	D	G	R	L	R	V	N	D	S	I	L	F	V	N	E	V	D	V	R	E	V	T	H	S	A	A	V	E	A	L	K	E	A	G	S	I	V	R	L	Y	V	M	R	R	K	P	P	A	E	K	V	M	E	I	K	L	I	K	G	P	K
Template Known Secondary structure		S	S	S										T	T	S					S					T	T						S	S	S			G	G	G													T		S	S										S														S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																									.																	.	.
Query SS confidence																																									.																	.	.
Query Sequence		V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R
Query Conservation																																									.																	.	.
Alig confidence													.	.	.																										.																	.	.
Template Conservation													.	.	.
Template Sequence		G	L	G	F	S	I	A	G	G	V	G	.	.	.	N	Q	H	I	P	G	D	N	S	I	Y	V	T	K	I	I	E	G	G	A	A	H	K	D	G	R	L	Q	I	G	D	K	I	L	A	V	N	S	V	G	L	E	D	V	M	H	E	D	A	V	A	A	L	K	N	T	Y	D	V	V	Y	L	K	V	A	K
Template Known Secondary structure		S	S	S	S					T	B	T	.	.	.	T			S	T	T			S								S	S	S	T	T	T	T	T	T				T	T						B	T	T	B				S	S	B										T			S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		465	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	N
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		243	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions