Job Description P0C0V0 Confidence 99.11% Date Thu Jan 5 11:30:02 GMT 2012 Rank 175 Aligned Residues 65 % Identity 25% Template c2vspA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1 Resolution 2.60 Å

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		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		G	F	H	L	N	A	I	R	G	L	P	G	S	F	I	K	E	V	Q	K	G	G	P	A	D	L	A	G	L	E	D	E	D	V	I	I	E	V	N	G	V	N	V	L	D	E	P	Y	E	K	V	V	D	R	I	Q	S	S	G	K	N	V	T	L	L	V	C
Template Known Secondary structure		S				B			T	T		S			B		.				T	T	S					T	T			T	T							T	T				T	T	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions