Job Description P0C0V0 Confidence 94.67% Date Thu Jan 5 11:30:02 GMT 2012 Rank 333 Aligned Residues 125 % Identity 18% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G
Query Conservation
Alig confidence										.															.	.	.							.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation										.															.	.	.							.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	G	I	H	M	E	.	G	V	F	H	T	M	W	H	V	T	R	G	S	V	.	.	.	I	C	H	E	T	G	.	.	.	R	L	E	P	S	W	A	D	V	R	N	D	M	I	S	Y	.	.	.	.	.	.	.	.	.	G	G	G	W	R	L	G	D	K	W	D	K	E	E	D	V	Q	V	L	A
Template Known Secondary structure									T	.	T										T	T			.	.	.				S	S		.	.	.									T	T	T	T					.	.	.	.	.	.	.	.	.	S	S	S									S	S
Template Predicted Secondary structure										.															.	.	.							.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N
Query Conservation
Alig confidence																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		I	E	P	G	K	N	P	K	H	V	Q	T	K	P	G	L	F	K	T	L	T	G	E	I	.	.	.	.	.	.	G	A	V	T	L	D	F	K	P	G	T	S	G	S	P	I	I	N	K	K	G	K	V	I	G	L	Y	G	N	G	V	V	T	K	S	G	D
Template Known Secondary structure				T	T	S															S	S	S			.	.	.	.	.	.									T	T		T	T						S	S	S	S												S	S	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions