Job Description P0C0V0 Confidence 99.91% Date Thu Jan 5 11:30:02 GMT 2012 Rank 27 Aligned Residues 177 % Identity 21% Template c2qt5A_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:glutamate receptor-interacting protein 1; PDBTitle: crystal structure of grip1 pdz12 in complex with the fras12 peptide Resolution 2.30 Å

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.							.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																						.	.	.	.	.	.																						.
Query SS confidence																						.	.	.	.	.	.																						.
Query Sequence		G	E	L	G	I	M	G	T	E	L	N	S	E	L	A	K	A	M	K	V	.	.	.	.	.	.	D	A	Q	R	G	A	F	V	S	Q	V	L	P	N	S	S	A	A	K	A	G	.	I	K	A	G	D	V	I	T	S	L	N	G	K	P	I	S	S	F	A	A	L	R	A	Q	V	G	T	M	P	V	G	S
Query Conservation																						.	.	.	.	.	.																						.
Alig confidence																						.	.	.	.	.	.																						.
Template Conservation
Template Sequence		S	F	K	G	S	T	V	V	E	L	M	K	K	E	G	T	T	L	G	L	T	V	S	G	G	I	D	K	D	G	K	P	R	V	S	N	L	R	Q	G	G	I	A	A	R	S	D	Q	L	D	V	G	D	Y	I	K	A	V	N	G	I	N	L	A	K	F	R	H	D	E	I	I	S	L	L	K	N	V	G	E
Template Known Secondary structure															T	T											T	T	S	S	S		S							T	T	S					T	T	S			T	T							T	T				T	T	S											T			S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																																			.
Query SS confidence																	.	.	.	.																																																			.
Query Sequence		K	L	T	L	G	L	L	R	D	G	K	Q	V	N	V	.	.	.	.	N	L	E	L	Q	Q	S	S	Q	N	Q	V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A
Query Conservation																	.	.	.	.																																																			.
Alig confidence																	.	.	.	.																																																			.
Template Conservation
Template Sequence		R	V	V	L	E	V	E	Y	E	L	P	P	V	S	I	Q	G	S	S	V	M	F	R	T	V	E	V	T	L	H	K	E	G	N	T	F	G	F	V	I	R	G	G	A	H	D	D	R	N	K	S	R	P	V	V	I	T	C	V	R	P	G	G	P	A	D	R	E	G	T	I	K	P	G	D	R	L	L	S	V
Template Known Secondary structure																			S	S													B	T	T	B		S									S	S	T	T	T											T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		437	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R	G
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		D	G	I	R	L	L	G	T	T	H	A	E	A	M	S	I	L	K	Q	C	G	Q	E	A	T	L	L	I	E	Y	D
Template Known Secondary structure		T	T				T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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