Job Description P0C0V0 Confidence 85.95% Date Thu Jan 5 11:30:02 GMT 2012 Rank 371 Aligned Residues 153 % Identity 19% Template c2oq5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transmembrane protease, serine 11e; PDBTitle: crystal structure of desc1, a new member of the type ii2 transmembrane serine proteinases family Resolution 1.61 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170						.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	V	I	K	V	Q	L	.	.	.	.	.	.	.	.	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	.	.	.	.	.	.	.	D	I	A	L	I	Q	I	Q	N	P	.	.	.	.	.	K	N
Query Conservation																																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence												.	.																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation												.	.
Template Sequence		R	C	G	A	T	L	I	N	A	T	.	.	W	L	V	S	A	A	H	C	F	T	T	Y	K	N	P	A	R	W	T	A	S	F	G	V	T	I	K	P	S	K	M	K	R	G	L	R	R	I	I	V	H	E	K	Y	K	H	P	S	H	D	Y	D	I	S	L	A	E	L	S	S	P	V	P	Y	T	N	A	V
Template Known Secondary structure										T	T	.	.						G	G	G	G	S	S				G	G	G						S	S	B	S	T	T		S												T	T			T	T			T	T								S	S						S	S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.												.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	.	.	.	.	.	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	A	I	.	.	.	.	.	.	.	.	.	.	.	N	R	G	N	S
Query Conservation																													.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	V	C	L	P	D	A	S	Y	E	F	Q	P	G	D	V	M	F	V	T	G	F	G	A	L	K	N	D	G	Y	S	Q	N	H	L	R	Q	A	Q	V	T	L	I	D	A	T	T	C	N	E	P	Q	A	Y	N	D	A	I	T	P	R	M	L	C	A	G	S	L	E	G	K	T	D	A	C	Q	G	D	S
Template Known Secondary structure					B				T	T					T	T								S			S	S	T	T					S	B															T	S	T	T	T	T	T	T				T	T							T	T		S	S	B			T	T		T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		G	G	A	L	V	N	L	N	G	E	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		G	G	P	L	V	S	S	D	A	R	D	I	W	Y	L	A	G	I	V	S	W	G	D	E	C	A	K	P	N	K	P	G	V	Y	T
Template Known Secondary structure		T								T	T	S												S	S	S	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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