Job Description P0C0V0 Confidence 99.31% Date Thu Jan 5 11:30:02 GMT 2012 Rank 74 Aligned Residues 82 % Identity 21% Template c2jikB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein Resolution 1.35 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																										.																	.	.
Query SS confidence																																										.																	.	.
Query Sequence		Q	V	D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q
Query Conservation																																										.																	.	.
Alig confidence																																										.																	.	.
Template Conservation
Template Sequence		N	L	T	R	G	P	S	G	L	G	F	N	I	V	G	G	T	D	Q	Q	Y	D	S	G	I	Y	V	S	R	I	K	E	N	G	A	A	A	L	D	G	R	L	Q	E	G	D	K	I	L	S	V	N	G	Q	D	L	K	N	L	L	H	Q	D	A	V	D	L	F	R	N	A	G	Y	A	V	S	L	R	V	Q
Template Known Secondary structure						B	T	T	B	S							S	T	T	S													T	T	S										T	T							T	T				S	S												T			S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		464	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	D	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	L	E	S
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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