Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0V0
Confidence98.38%DateThu Jan 5 11:30:02 GMT 2012
Rank248Aligned Residues175
% Identity19%Templatec2i6sA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130..... ....140... ......150.........160 ........
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Query Sequence  LGSGVIIDADKGYVVTNNHVVDN. . . ATVIKVQL. . . . . SDGRKFDAKMVGKDPRS. . . . . . . . . . . . . . . . DIALIQIQ
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Template Sequence  TCRGALISDQ. . WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLA
Template Known Secondary structure 
SSSS..
GGGGTT
S
GGG


SS
SS


TT

GGGGGGGT
S


TT

S
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   471........480 .........490.........500.........510.........520.........530.........540........
 
   169170 .........180..... ....190.........200.........210.....
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Query Sequence  NP. . . . KNLTAIKMADSDALR. . . . . . . . . . . . . . . . . . VGDYTVAIGNPFGLGETVTSGIVSALGRSG. . . . . . . . . . .
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Template Sequence  QKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTM
Template Known Secondary structure  S



SSS



B
TTBTT

TT

S
SS
TT
S
GGGGG

SS
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   549550.........560.........570.........580.........590.........600.........610.........620........
 
   216...220....... ..230.........240...... ...250.........260.... .....270
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Query Sequence  . . . . . . LNAENYENFIQT. . . . DAAINRGNSGGALVNLNGE. . . LIGINTAILAPDGGNIGI. . . . . . . . . . . . GFAIPS
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Template Sequence  FPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKRAPRSKVPPPRDFHINL
Template Known Secondary structure 
TT


GGGT

TT

TT




GGGTT
TTS

TTTT







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G
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   629630.........640.........650.........660.........670.........680.........690.........700........
 
   271........280.........
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Query Sequence  NMVKNLTSQMVEYGQVKRG
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Template Sequence  FRMQPWLRQHLGDVLNFLP
Template Known Secondary structure  GGGTTTS
B

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   713......720.........730.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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