Job Description P0C0V0 Confidence 72.30% Date Thu Jan 5 11:30:02 GMT 2012 Rank 389 Aligned Residues 58 % Identity 19% Template c2fwkB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:u6 snrna-associated sm-like protein lsm5; PDBTitle: crystal structure of cryptosporidium parvum u6 snrna-associated sm-2 like protein lsm5 Resolution 2.14 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	K	V	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	D	I	A	L	I	Q	I	Q	N	P	K	N	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G
Query Conservation
Alig confidence																																						.							.	.														.
Template Conservation																																						.							.	.														.
Template Sequence		N	R	I	Y	V	V	M	K	G	D	K	E	F	S	G	V	L	R	G	F	D	E	Y	V	N	M	V	L	D	D	V	Q	E	Y	G	V	.	M	V	N	R	L	E	.	.	T	I	L	L	S	G	N	N	V	A	M	L	V	.	P	G	G
Template Known Secondary structure		S							S	T	T												T	T														.						S	.	.	S					G	G	G						.	S
Template Predicted Secondary structure																																						.							.	.														.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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