Job Description P0C0V0 Confidence 98.96% Date Thu Jan 5 11:30:02 GMT 2012 Rank 233 Aligned Residues 70 % Identity 26% Template c2d8iA_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:t-cell lymphoma invasion and metastasis 1 PDBTitle: solution structure of the pdz domain of t-cell lymphoma2 invasion and metastasis 1 varian Resolution UNK

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		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R	G
Query Conservation																																																		.	.
Alig confidence											.																																							.	.
Template Conservation											.
Template Sequence		Y	G	F	S	L	S	S	V	E	.	E	D	G	I	R	R	L	Y	V	N	S	V	K	E	T	G	L	A	S	K	K	G	L	K	A	G	D	E	I	L	E	I	N	N	R	A	A	D	A	L	N	S	S	M	L	K	D	F	L	S	Q	P	S	L	G	L	L	V	R	T	Y	P	E
Template Known Secondary structure											.		T	T											T	T	S	S					T			T	T							S	S		B	G	G	G											T	S	S
Template Predicted Secondary structure											.
Template SS confidence
		31	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions