Job Description P0C0V0 Confidence 98.14% Date Thu Jan 5 11:30:02 GMT 2012 Rank 257 Aligned Residues 171 % Identity 19% Template c1z8gA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:serine protease hepsin; PDBTitle: crystal structure of the extracellular region of the transmembrane2 serine protease hepsin with covalently bound preferred substrate. Resolution 1.55 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160														.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	.	.	.	.	A	T	V	I	K	V	Q	L	.	.	.	.	.	.	.	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	A	L	I	Q	I	Q
Query Conservation																									.	.	.	.									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.												.	.	.	.									.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		L	C	G	G	S	L	L	S	G	D	.	.	W	V	L	T	A	A	H	C	F	P	E	R	N	R	V	L	S	R	W	R	V	F	A	G	A	V	A	Q	A	S	P	H	G	L	Q	L	G	V	Q	A	V	V	Y	H	G	G	Y	L	P	F	R	D	P	N	S	E	E	N	S	N	D	I	A	L	V	H	L	S
Template Known Secondary structure								S	S	S	S	.	.						G	G	G			G	G	G			G	G	G						S		S	B	T	T		T	T	S												T	T		G	G	G	T		T	T					T	T								S
Template Predicted Secondary structure												.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		169	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																									.	.	.	.	.																			.	.	.	.	.	.														.	.	.	.	.
Query SS confidence						.	.	.	.	.																									.	.	.	.	.																			.	.	.	.	.	.														.	.	.	.	.
Query Sequence		N	P	K	N	.	.	.	.	.	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	.	.	.	.	.	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	R	S	.	.	.	.	.	.	G	L	N	A	E	N	Y	E	N	F	I	Q	T	.	.	.	.	.
Query Conservation						.	.	.	.	.																									.	.	.	.	.																			.	.	.	.	.	.														.	.	.	.	.
Alig confidence						.	.	.	.	.																									.	.	.	.	.																			.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		S	P	L	P	L	T	E	Y	I	Q	P	V	C	L	P	A	A	G	Q	A	L	V	D	G	K	I	C	T	V	T	G	W	G	N	T	Q	Y	Y	G	Q	Q	A	G	V	L	Q	E	A	R	V	P	I	I	S	N	D	V	C	N	G	A	D	F	Y	G	N	Q	I	K	P	K	M	F	C	A	G	Y	P	E	G
Template Known Secondary structure		S						S	S					B				T	T					T	T								S	S	B	S	S	T	T	S		B		S	B															T	S	T	T	T	T	T	T				T	T					S		T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		D	A	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	G	.	.	.	.	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F	A	I	P	S	N	M	V	K	N	L	T	S	Q	M	V	E	Y	G	Q
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	D	A	C	Q	G	D	S	G	G	P	F	V	C	E	D	S	I	S	R	T	P	R	W	R	L	C	G	I	V	S	W	G	T	G	C	A	L	A	Q	K	P	G	V	Y	T	K	V	S	D	F	R	E	W	I	F	Q	A	I	K	T	H	S	E
Template Known Secondary structure		S		B			T	T		T	T									T	T	S	S													S	S	S	S		T	T								G	G	G	G											T	T	T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions