Job Description P0C0V0 Confidence 99.49% Date Thu Jan 5 11:30:02 GMT 2012 Rank 59 Aligned Residues 139 % Identity 14% Template c1z87A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin Resolution UNK

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		328	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure				.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	.	I	K	A	G	D	V	I	T	S	L	N	G	K	P	I	S	S	F	A	A	L	R	A	Q	V	G	T	M	P	V	G	S	K	L	T	L	G	L	L	R	D	G	K	Q	V	N	V	N	L	E	L	Q	Q	S	S	Q	N	Q	V	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	R	R	A	P	R	T	G	L	L	E	L	R	C	G	A	G	S	G	A	G	G	E	R	W	Q	R	V	L	L	S	L	A	E	D	A	L	T	V	S	P	A	D	G	E	P	G	P	E	P	E	P	A	Q	L	N	G	A	A	E	P	G	A	A	P	P	Q	L	P	E	A	L	L	L	Q	R	R	R	V
Template Known Secondary structure				S													S	T	T	S			S	S												S	S										S			S		S	S					S		S		S	S	S	S	S		S					T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
					391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.	.	.																																					.																	.	.
Query SS confidence		.	.	.																																					.																	.	.
Query Sequence		.	.	.	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R
Query Conservation		.	.	.																																					.																	.	.
Alig confidence		.	.	.																																					.																	.	.
Template Conservation
Template Sequence		T	V	R	K	A	D	A	G	G	L	G	I	S	I	K	G	G	R	E	N	K	M	P	I	L	I	S	K	I	F	K	G	L	A	A	D	Q	T	E	A	L	F	V	G	D	A	I	L	S	V	N	G	E	D	L	S	S	A	T	H	D	E	A	V	Q	A	L	K	K	T	G	K	E	V	V	L	E	V	K	Y
Template Known Secondary structure					T	T	T	T											T	T	T	T										T	T	S						T	T			S	S							S	S		B		T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		465	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		163	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions