Job Description P0C0V0 Confidence 96.52% Date Thu Jan 5 11:30:02 GMT 2012 Rank 310 Aligned Residues 152 % Identity 16% Template c1ybwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hepatocyte growth factor activator precursor; PDBTitle: protease domain of hgfa with no inhibitor Resolution 2.70 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																											.	.	.	.					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	D	A	D	K	G	Y	V	V	T	N	N	H	V	V	D	N	A	T	.	.	.	.	V	I	K	V	.	.	.	.	.	.	.	.	.	Q	L	S	D	G	R	K	F	D	A	K	M	V	G	K	D	P	R	S	D	.	.	.	.	.	.	.	I	A	L	I	Q	I	Q	N	P	K	N
Query Conservation																											.	.	.	.					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence												.	.														.	.	.	.					.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		F	C	A	G	S	L	V	H	T	C	.	.	W	V	V	S	A	A	H	C	F	S	H	S	P	P	R	D	S	V	S	V	V	L	G	Q	H	F	F	N	R	T	T	D	V	T	Q	T	F	G	I	E	K	Y	I	P	Y	T	L	Y	S	V	F	N	P	S	D	H	D	L	V	L	I	R	L	K	K	K	G	D
Template Known Secondary structure										T	T	.	.						G	G	G	T	T	T				G	G	G						S			B	T	T				S	S													T	T		B	T	T	B		S	T	T										S	S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		431	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
											173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.											.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	T	A	I	K	M	A	D	S	D	A	L	R	V	G	D	Y	T	V	A	I	G	N	P	F	G	L	G	E	T	V	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	.	R	S	G	L	N	A	E	N	Y	E	N	F	I	Q	T	D	A	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		R	C	A	T	R	S	Q	F	V	Q	P	I	C	L	P	E	P	G	S	T	F	P	A	G	H	K	C	Q	I	A	G	W	G	H	L	D	E	N	V	S	G	Y	S	S	S	L	R	E	A	L	V	P	L	V	A	D	H	K	C	S	S	P	E	V	Y	G	A	D	I	S	P	N	M	L	C	A	G	Y	F	D
Template Known Secondary structure				S			S	S	S					B				T	T					T	T								S			S	S	S	S	S		S			S	B								B								S	T	T	T	T	T	T	S	S		T	T					S		S	S
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.	.	.
Query SS confidence		.	.	.																	.	.	.
Query Sequence		.	.	.	A	I	N	R	G	N	S	G	G	A	L	V	N	L	N	G	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	D	G	G	N	I	G	I	G	F
Query Conservation		.	.	.																	.	.	.
Alig confidence		.	.	.																	.	.	.
Template Conservation
Template Sequence		C	K	S	D	A	C	Q	G	D	S	G	G	P	L	A	C	E	K	N	G	V	A	Y	L	Y	G	I	I	S	W	G	D	G	C	G	R	L	H	K	P	G	V	Y
Template Known Secondary structure		S	S	S	B			T	T	T	T	T								T	T														T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions