Job Description P0C0V0 Confidence 99.10% Date Thu Jan 5 11:30:02 GMT 2012 Rank 179 Aligned Residues 76 % Identity 17% Template c1x45A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:amyloid beta (a4) precursor protein-binding, PDBTitle: solution structure of the first pdz domain of amyloid beta2 a4 precursor protein-binding family a, member 1 Resolution UNK

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		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																								.																	.	.
Query SS confidence																																								.																	.	.
Query Sequence		D	S	S	S	I	F	N	G	I	E	G	A	E	M	S	N	K	G	K	D	Q	G	V	V	V	N	N	V	K	T	G	T	P	A	A	Q	I	G	.	L	K	K	G	D	V	I	I	G	A	N	Q	Q	A	V	K	.	.	N	I	A	E	L	R	K	V	L	D	S	K	P	S	V	L	A	L	N	I	Q	R
Query Conservation																																								.																	.	.
Alig confidence																																								.																	.	.
Template Conservation
Template Sequence		K	Q	K	G	E	I	L	G	V	V	I	V	E	S	G	W	G	S	I	L	P	T	V	I	I	A	N	M	M	H	G	G	P	A	E	K	S	G	K	L	N	I	G	D	Q	I	M	S	I	N	G	T	S	L	V	G	L	P	L	S	T	C	Q	S	I	I	K	G	L	K	N	Q	S	R	V	K	L	N	I
Template Known Secondary structure				T	T	S										T	T	T	S	S	S										T	T								S			T	T							T	T				T	T												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions